Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 AL023803.3-201ENST00000615559 522 ntBASIC17.4■□□□□ 0.38
NUP43Q8NFH3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.4■□□□□ 0.38
NUP43Q8NFH3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NUP43Q8NFH3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.39■□□□□ 0.38
NUP43Q8NFH3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
NUP43Q8NFH3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.39■□□□□ 0.38
NUP43Q8NFH3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
NUP43Q8NFH3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 CCR12P-201ENST00000446203 998 ntBASIC17.39■□□□□ 0.37
NUP43Q8NFH3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 AP003041.3-201ENST00000527151 707 ntBASIC17.39■□□□□ 0.37
NUP43Q8NFH3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 AL353719.1-201ENST00000566847 864 ntBASIC17.39■□□□□ 0.37
NUP43Q8NFH3 MIR4674-201ENST00000582457 87 ntBASIC17.39■□□□□ 0.37
NUP43Q8NFH3 MIR3180-5-201ENST00000583743 153 ntBASIC17.39■□□□□ 0.37
NUP43Q8NFH3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NUP43Q8NFH3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 KRT18P41-201ENST00000518924 1277 ntBASIC17.38■□□□□ 0.37
NUP43Q8NFH3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.38■□□□□ 0.37
NUP43Q8NFH3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP43Q8NFH3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 AC135050.7-201ENST00000624508 2218 ntBASIC17.37■□□□□ 0.37
NUP43Q8NFH3 AC090340.1-201ENST00000620778 4980 ntBASIC17.37■□□□□ 0.37
NUP43Q8NFH3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 MYLKP1-201ENST00000509077 1580 ntBASIC17.37■□□□□ 0.37
NUP43Q8NFH3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 AC034236.2-201ENST00000606662 1610 ntBASIC17.37■□□□□ 0.37
NUP43Q8NFH3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms