Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF1Q8NEP3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.38■□□□□ 0.21
DNAAF1Q8NEP3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF1Q8NEP3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF1Q8NEP3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF1Q8NEP3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNAAF1Q8NEP3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 HLA-L-209ENST00000420110 1011 ntBASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 MTDHP1-201ENST00000605323 784 ntBASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DNAAF1Q8NEP3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 AC026366.1-201ENST00000488803 879 ntBASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 HLA-A-209ENST00000638375 975 ntBASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DNAAF1Q8NEP3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 TSPY23P-201ENST00000440136 739 ntBASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 AC069544.1-201ENST00000609399 999 ntBASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DNAAF1Q8NEP3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF1Q8NEP3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DNAAF1Q8NEP3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
DNAAF1Q8NEP3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms