Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC01555Q8NAE3 AL138781.2-201ENST00000617896 1843 ntBASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 WIZP1-201ENST00000531444 2299 ntBASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 HYMAI.1-201ENST00000620949 238 ntBASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC01555Q8NAE3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 KRT18P35-201ENST00000510488 1269 ntBASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 LINC01238-205ENST00000567549 1107 ntBASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 AL445228.2-201ENST00000605589 952 ntBASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 AC079602.3-201ENST00000623931 403 ntBASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC01555Q8NAE3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 AC112907.2-201ENST00000448639 330 ntBASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 AC092597.1-201ENST00000487352 616 ntBASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC01555Q8NAE3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.83■□□□□ 0.45
LINC01555Q8NAE3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
LINC01555Q8NAE3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms