Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
NGEFQ8N5V2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NGEFQ8N5V2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC24.42■■□□□ 1.5
NGEFQ8N5V2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC24.42■■□□□ 1.5
NGEFQ8N5V2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
NGEFQ8N5V2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.41■■□□□ 1.5
NGEFQ8N5V2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 AL031133.1-201ENST00000406807 723 ntBASIC24.41■■□□□ 1.5
NGEFQ8N5V2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 AL441883.1-201ENST00000566170 1045 ntBASIC24.41■■□□□ 1.5
NGEFQ8N5V2 LINC01238-205ENST00000567549 1107 ntBASIC24.41■■□□□ 1.5
NGEFQ8N5V2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 BICD1-207ENST00000551848 1962 ntBASIC24.41■■□□□ 1.5
NGEFQ8N5V2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NGEFQ8N5V2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.4■■□□□ 1.5
NGEFQ8N5V2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 FAM8A6P-201ENST00000407496 1135 ntBASIC24.4■■□□□ 1.5
NGEFQ8N5V2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NGEFQ8N5V2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NGEFQ8N5V2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
NGEFQ8N5V2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.39■■□□□ 1.5
NGEFQ8N5V2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NGEFQ8N5V2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
NGEFQ8N5V2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NGEFQ8N5V2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
NGEFQ8N5V2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
NGEFQ8N5V2 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.39■■□□□ 1.49
NGEFQ8N5V2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 AL359075.1-203ENST00000462729 1002 ntBASIC24.39■■□□□ 1.49
NGEFQ8N5V2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 AC009065.1-201ENST00000564055 1225 ntBASIC24.39■■□□□ 1.49
NGEFQ8N5V2 NEK4P2-201ENST00000580004 1012 ntBASIC24.39■■□□□ 1.49
NGEFQ8N5V2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
NGEFQ8N5V2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 AC104390.1-201ENST00000555663 520 ntBASIC24.38■■□□□ 1.49
NGEFQ8N5V2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.38■■□□□ 1.49
NGEFQ8N5V2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms