Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 AC073592.3-201ENST00000625118 1834 ntBASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 MIR564-202ENST00000385049 94 ntBASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 KRT18P41-201ENST00000518924 1277 ntBASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 C2orf69P3-201ENST00000565542 1120 ntBASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TTC9CQ8N5M4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 AC005082.1-201ENST00000413042 2259 ntBASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 MIR1238-201ENST00000408483 83 ntBASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 AC116562.4-202ENST00000641738 218 ntBASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.68□□□□□ -0.06
TTC9CQ8N5M4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 AL390955.1-201ENST00000428694 934 ntBASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.67□□□□□ -0.06
TTC9CQ8N5M4 MIR3180-5-201ENST00000583743 153 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms