Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
FAM43AQ8N2R8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 AC026396.1-201ENST00000419388 421 ntBASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
FAM43AQ8N2R8 AC009053.2-201ENST00000563701 2365 ntBASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 DPP3P2-201ENST00000416030 1696 ntBASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 AL023803.3-201ENST00000615559 522 ntBASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.72■■□□□ 1.23
FAM43AQ8N2R8 TREX1-205ENST00000625293 1783 ntBASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 AL450487.1-201ENST00000426799 995 ntBASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
FAM43AQ8N2R8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.7■■□□□ 1.23
FAM43AQ8N2R8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
FAM43AQ8N2R8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.23
FAM43AQ8N2R8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
FAM43AQ8N2R8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 AL359075.1-203ENST00000462729 1002 ntBASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.7■■□□□ 1.22
FAM43AQ8N2R8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms