Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
COL23A1Q86Y22 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
COL23A1Q86Y22 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 OR7E14P-202ENST00000530490 1290 ntBASIC23.26■■□□□ 1.31
COL23A1Q86Y22 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL23A1Q86Y22 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 AC004832.2-201ENST00000426397 482 ntBASIC23.25■■□□□ 1.31
COL23A1Q86Y22 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 RBSN-204ENST00000449050 903 ntTSL 2 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
COL23A1Q86Y22 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 MIR3197-201ENST00000582241 73 ntBASIC23.24■■□□□ 1.31
COL23A1Q86Y22 AC025062.2-201ENST00000605477 670 ntBASIC23.24■■□□□ 1.31
COL23A1Q86Y22 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.24■■□□□ 1.31
COL23A1Q86Y22 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL23A1Q86Y22 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 AC068472.1-201ENST00000474589 881 ntBASIC23.23■■□□□ 1.31
COL23A1Q86Y22 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.23■■□□□ 1.31
COL23A1Q86Y22 GABARAPL3-202ENST00000624044 1851 ntBASIC23.23■■□□□ 1.31
COL23A1Q86Y22 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 KRT8P50-201ENST00000562022 1438 ntBASIC23.23■■□□□ 1.31
COL23A1Q86Y22 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.23■■□□□ 1.31
COL23A1Q86Y22 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 UNC93B6-202ENST00000528242 690 ntBASIC23.22■■□□□ 1.31
COL23A1Q86Y22 AC009533.2-201ENST00000543664 586 ntBASIC23.22■■□□□ 1.31
COL23A1Q86Y22 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms