Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 AL450487.1-201ENST00000426799 995 ntBASIC16.41■□□□□ 0.22
RTTNQ86VV8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 SLC25A3P1-201ENST00000443844 931 ntBASIC16.41■□□□□ 0.22
RTTNQ86VV8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RTTNQ86VV8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTTNQ86VV8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RTTNQ86VV8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RTTNQ86VV8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RTTNQ86VV8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RTTNQ86VV8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.39■□□□□ 0.22
RTTNQ86VV8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.39■□□□□ 0.22
RTTNQ86VV8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.39■□□□□ 0.22
RTTNQ86VV8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.39■□□□□ 0.22
RTTNQ86VV8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.39■□□□□ 0.22
RTTNQ86VV8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RTTNQ86VV8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 AK4P3-201ENST00000418260 669 ntBASIC16.39■□□□□ 0.21
RTTNQ86VV8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 AC009113.1-201ENST00000570267 2443 ntBASIC16.39■□□□□ 0.21
RTTNQ86VV8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTTNQ86VV8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.39■□□□□ 0.21
RTTNQ86VV8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.38■□□□□ 0.21
RTTNQ86VV8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTTNQ86VV8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms