Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 AL137784.2-201ENST00000607332 1000 ntBASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM1Q86UE6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRTM1Q86UE6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.14■□□□□ 0.18
LRRTM1Q86UE6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRTM1Q86UE6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
LRRTM1Q86UE6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
LRRTM1Q86UE6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 POM121L13P-201ENST00000422362 380 ntBASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 NCF1B-203ENST00000435988 1254 ntBASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 UNC93B4-201ENST00000505679 747 ntBASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 REXO1L9P-201ENST00000604264 2108 ntBASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM1Q86UE6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 AC139713.2-201ENST00000641328 2723 ntBASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 AC004264.1-201ENST00000608354 794 ntBASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 HTR7P1-202ENST00000624664 4411 ntBASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
LRRTM1Q86UE6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms