Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 GCSHP2-201ENST00000560971 527 ntBASIC17.82■□□□□ 0.44
RNF44Q7L0R7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 AC010331.1-201ENST00000611423 582 ntBASIC17.82■□□□□ 0.44
RNF44Q7L0R7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF44Q7L0R7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 MIR1224-201ENST00000408193 85 ntBASIC17.81■□□□□ 0.44
RNF44Q7L0R7 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.81■□□□□ 0.44
RNF44Q7L0R7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 SEC1P-202ENST00000473944 940 ntBASIC17.81■□□□□ 0.44
RNF44Q7L0R7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RNF44Q7L0R7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 FAM8A6P-201ENST00000407496 1135 ntBASIC17.8■□□□□ 0.44
RNF44Q7L0R7 HOMER2P1-201ENST00000455653 964 ntBASIC17.8■□□□□ 0.44
RNF44Q7L0R7 KRT18P41-201ENST00000518924 1277 ntBASIC17.8■□□□□ 0.44
RNF44Q7L0R7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 AC024243.1-201ENST00000609234 778 ntBASIC17.8■□□□□ 0.44
RNF44Q7L0R7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF44Q7L0R7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.79■□□□□ 0.44
RNF44Q7L0R7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 AC093525.10-201ENST00000625130 1569 ntBASIC17.79■□□□□ 0.44
RNF44Q7L0R7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms