Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 AC126763.1-201ENST00000552015 2118 ntBASIC16.33■□□□□ 0.21
HIST2H3AQ71DI3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 MCCD1P1-208ENST00000445732 328 ntBASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H3AQ71DI3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 AC104581.1-202ENST00000635932 2618 ntBASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 KRT17P2-201ENST00000300992 1314 ntBASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 NEFHP1-201ENST00000412845 2629 ntBASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 SLC25A1P2-201ENST00000430693 912 ntBASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H3AQ71DI3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 TSPY17P-201ENST00000450329 467 ntBASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 SNORA78-201ENST00000459373 127 ntBASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 MIR4674-201ENST00000582457 87 ntBASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 AP000525.1-201ENST00000608286 694 ntBASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 BICD1-207ENST00000551848 1962 ntBASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H3AQ71DI3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HIST2H3AQ71DI3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms