Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 PRKY-204ENST00000533551 1019 ntBASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 NBPF21P-201ENST00000425093 1451 ntBASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 RNA5SP413-201ENST00000516373 109 ntBASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 AP003097.1-201ENST00000530657 1135 ntBASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 ESPNP-201ENST00000270691 2015 ntBASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTCHD4Q6ZW05 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 AC233263.1-201ENST00000578059 224 ntBASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 HLA-A-209ENST00000638375 975 ntBASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms