Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQA1Q5Y7H0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQA1Q5Y7H0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC005521.1-201ENST00000393351 872 ntBASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 WWOX-216ENST00000569818 525 ntBASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQA1Q5Y7H0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 TERF1P1-201ENST00000311003 1181 ntBASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC010203.1-204ENST00000548782 407 ntBASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC141257.4-201ENST00000634557 245 ntBASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC136944.6-201ENST00000634818 245 ntBASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC087289.5-201ENST00000586076 3175 ntBASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQA1Q5Y7H0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 MIR564-202ENST00000385049 94 ntBASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC009947.2-201ENST00000444014 672 ntBASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC140113.3-201ENST00000605663 199 ntBASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms