Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.42■□□□□ 0.38
RPS3AP61247 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS3AP61247 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.42■□□□□ 0.38
RPS3AP61247 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.42■□□□□ 0.38
RPS3AP61247 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.42■□□□□ 0.38
RPS3AP61247 HLA-A-209ENST00000638375 975 ntBASIC17.42■□□□□ 0.38
RPS3AP61247 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS3AP61247 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS3AP61247 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RPS3AP61247 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS3AP61247 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RPS3AP61247 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RPS3AP61247 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS3AP61247 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS3AP61247 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS3AP61247 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS3AP61247 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RPS3AP61247 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.41■□□□□ 0.38
RPS3AP61247 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RPS3AP61247 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 FSCN1P1-201ENST00000568912 1481 ntBASIC17.41■□□□□ 0.38
RPS3AP61247 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RPS3AP61247 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RPS3AP61247 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS3AP61247 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RPS3AP61247 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RPS3AP61247 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RPS3AP61247 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS3AP61247 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RPS3AP61247 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.4■□□□□ 0.38
RPS3AP61247 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.4■□□□□ 0.38
RPS3AP61247 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.4■□□□□ 0.38
RPS3AP61247 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS3AP61247 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPS3AP61247 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS3AP61247 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS3AP61247 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.4■□□□□ 0.38
RPS3AP61247 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPS3AP61247 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS3AP61247 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
RPS3AP61247 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RPS3AP61247 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS3AP61247 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS3AP61247 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RPS3AP61247 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.39■□□□□ 0.38
RPS3AP61247 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.39■□□□□ 0.37
RPS3AP61247 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RPS3AP61247 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RPS3AP61247 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RPS3AP61247 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RPS3AP61247 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.39■□□□□ 0.37
RPS3AP61247 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.39■□□□□ 0.37
RPS3AP61247 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 AC004980.1-204ENST00000429707 299 ntBASIC17.39■□□□□ 0.37
RPS3AP61247 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.39■□□□□ 0.37
RPS3AP61247 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.39■□□□□ 0.37
RPS3AP61247 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.39■□□□□ 0.37
RPS3AP61247 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.39■□□□□ 0.37
RPS3AP61247 AL160286.2-201ENST00000567150 934 ntBASIC17.39■□□□□ 0.37
RPS3AP61247 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
RPS3AP61247 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 HTR7P1-202ENST00000624664 4411 ntBASIC17.39■□□□□ 0.37
RPS3AP61247 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.39■□□□□ 0.37
RPS3AP61247 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS3AP61247 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms