Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.46■□□□□ 0.87
PEX3P56589 AL359075.1-203ENST00000462729 1002 ntBASIC20.46■□□□□ 0.87
PEX3P56589 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.46■□□□□ 0.87
PEX3P56589 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.46■□□□□ 0.87
PEX3P56589 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX3P56589 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.46■□□□□ 0.87
PEX3P56589 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.46■□□□□ 0.87
PEX3P56589 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.46■□□□□ 0.87
PEX3P56589 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.46■□□□□ 0.87
PEX3P56589 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PEX3P56589 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX3P56589 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PEX3P56589 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.46■□□□□ 0.87
PEX3P56589 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX3P56589 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX3P56589 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PEX3P56589 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PEX3P56589 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PEX3P56589 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PEX3P56589 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
PEX3P56589 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.45■□□□□ 0.86
PEX3P56589 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.45■□□□□ 0.86
PEX3P56589 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.45■□□□□ 0.86
PEX3P56589 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.45■□□□□ 0.86
PEX3P56589 SPDYE15P-201ENST00000424157 909 ntBASIC20.45■□□□□ 0.86
PEX3P56589 KRT18P38-201ENST00000449496 1282 ntBASIC20.45■□□□□ 0.86
PEX3P56589 HOMER2P1-201ENST00000455653 964 ntBASIC20.45■□□□□ 0.86
PEX3P56589 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.45■□□□□ 0.86
PEX3P56589 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.45■□□□□ 0.86
PEX3P56589 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.45■□□□□ 0.86
PEX3P56589 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.45■□□□□ 0.86
PEX3P56589 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.45■□□□□ 0.86
PEX3P56589 AC010240.3-201ENST00000607688 395 ntBASIC20.45■□□□□ 0.86
PEX3P56589 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.45■□□□□ 0.86
PEX3P56589 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PEX3P56589 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
PEX3P56589 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.45■□□□□ 0.86
PEX3P56589 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PEX3P56589 AC112777.1-201ENST00000540175 1423 ntBASIC20.44■□□□□ 0.86
PEX3P56589 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PEX3P56589 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PEX3P56589 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.44■□□□□ 0.86
PEX3P56589 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.44■□□□□ 0.86
PEX3P56589 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 AC099343.3-201ENST00000605834 2503 ntBASIC20.44■□□□□ 0.86
PEX3P56589 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.44■□□□□ 0.86
PEX3P56589 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 FAM8A6P-201ENST00000407496 1135 ntBASIC20.44■□□□□ 0.86
PEX3P56589 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.44■□□□□ 0.86
PEX3P56589 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 NTF6B-201ENST00000591913 560 ntBASIC20.44■□□□□ 0.86
PEX3P56589 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PEX3P56589 AL157888.1-201ENST00000631930 593 ntBASIC20.44■□□□□ 0.86
PEX3P56589 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.44■□□□□ 0.86
PEX3P56589 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PEX3P56589 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PEX3P56589 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PEX3P56589 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PEX3P56589 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.44■□□□□ 0.86
PEX3P56589 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
PEX3P56589 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PEX3P56589 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.43■□□□□ 0.86
PEX3P56589 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.43■□□□□ 0.86
PEX3P56589 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 AP000593.1-201ENST00000393668 712 ntBASIC20.43■□□□□ 0.86
PEX3P56589 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.43■□□□□ 0.86
PEX3P56589 RASA4DP-201ENST00000460726 1199 ntBASIC20.43■□□□□ 0.86
PEX3P56589 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.43■□□□□ 0.86
PEX3P56589 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.43■□□□□ 0.86
PEX3P56589 MIR3917-201ENST00000580971 93 ntBASIC20.43■□□□□ 0.86
PEX3P56589 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.43■□□□□ 0.86
PEX3P56589 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
PEX3P56589 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 AL590326.2-201ENST00000625139 305 ntBASIC20.43■□□□□ 0.86
PEX3P56589 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms