Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.85□□□□□ -0.19
CMC4P56277 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CMC4P56277 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.85□□□□□ -0.19
CMC4P56277 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 AC073508.3-201ENST00000619697 1419 ntBASIC13.85□□□□□ -0.19
CMC4P56277 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 TMPOP1-202ENST00000424642 1267 ntBASIC13.85□□□□□ -0.19
CMC4P56277 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CMC4P56277 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CMC4P56277 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.85□□□□□ -0.19
CMC4P56277 AC010203.1-204ENST00000548782 407 ntBASIC13.85□□□□□ -0.19
CMC4P56277 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CMC4P56277 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.85□□□□□ -0.19
CMC4P56277 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.85□□□□□ -0.19
CMC4P56277 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.85□□□□□ -0.19
CMC4P56277 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.85□□□□□ -0.19
CMC4P56277 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.85□□□□□ -0.19
CMC4P56277 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
CMC4P56277 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.85□□□□□ -0.19
CMC4P56277 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CMC4P56277 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.84□□□□□ -0.19
CMC4P56277 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CMC4P56277 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.84□□□□□ -0.19
CMC4P56277 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.84□□□□□ -0.19
CMC4P56277 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.84□□□□□ -0.19
CMC4P56277 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 AK4P3-201ENST00000418260 669 ntBASIC13.84□□□□□ -0.19
CMC4P56277 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.84□□□□□ -0.19
CMC4P56277 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 AC092647.4-201ENST00000457211 535 ntBASIC13.84□□□□□ -0.19
CMC4P56277 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.84□□□□□ -0.19
CMC4P56277 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CMC4P56277 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CMC4P56277 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CMC4P56277 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.84□□□□□ -0.19
CMC4P56277 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.84□□□□□ -0.19
CMC4P56277 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMC4P56277 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.83□□□□□ -0.19
CMC4P56277 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.83□□□□□ -0.19
CMC4P56277 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CMC4P56277 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CMC4P56277 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
CMC4P56277 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.83□□□□□ -0.19
CMC4P56277 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CMC4P56277 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CMC4P56277 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 AC006333.2-201ENST00000607957 2099 ntBASIC13.83□□□□□ -0.2
CMC4P56277 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CMC4P56277 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CMC4P56277 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.83□□□□□ -0.2
CMC4P56277 TSPY5P-201ENST00000426936 936 ntBASIC13.83□□□□□ -0.2
CMC4P56277 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.83□□□□□ -0.2
CMC4P56277 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms