Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH12P55289 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH12P55289 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH12P55289 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH12P55289 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDH12P55289 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDH12P55289 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.33■□□□□ 0.37
CDH12P55289 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.33■□□□□ 0.37
CDH12P55289 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.33■□□□□ 0.37
CDH12P55289 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CDH12P55289 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.33■□□□□ 0.37
CDH12P55289 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH12P55289 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH12P55289 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH12P55289 AC128676.1-201ENST00000454392 318 ntBASIC17.33■□□□□ 0.36
CDH12P55289 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH12P55289 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH12P55289 CD99P1-205ENST00000527459 561 ntBASIC17.33■□□□□ 0.36
CDH12P55289 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.33■□□□□ 0.36
CDH12P55289 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDH12P55289 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.33■□□□□ 0.36
CDH12P55289 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH12P55289 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH12P55289 AL445675.2-201ENST00000620291 557 ntBASIC17.33■□□□□ 0.36
CDH12P55289 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CDH12P55289 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH12P55289 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDH12P55289 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDH12P55289 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.33■□□□□ 0.36
CDH12P55289 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH12P55289 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH12P55289 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH12P55289 MTMR9LP-203ENST00000426597 1545 ntBASIC17.32■□□□□ 0.36
CDH12P55289 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH12P55289 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH12P55289 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH12P55289 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.32■□□□□ 0.36
CDH12P55289 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.32■□□□□ 0.36
CDH12P55289 MIR4651-201ENST00000582622 73 ntBASIC17.32■□□□□ 0.36
CDH12P55289 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDH12P55289 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
CDH12P55289 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDH12P55289 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.32■□□□□ 0.36
CDH12P55289 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDH12P55289 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CDH12P55289 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CDH12P55289 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH12P55289 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH12P55289 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CDH12P55289 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH12P55289 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDH12P55289 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.31■□□□□ 0.36
CDH12P55289 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDH12P55289 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH12P55289 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CDH12P55289 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH12P55289 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH12P55289 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDH12P55289 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms