Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH11P55287 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH11P55287 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDH11P55287 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH11P55287 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH11P55287 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CDH11P55287 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH11P55287 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDH11P55287 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH11P55287 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 AL355355.2-201ENST00000442321 338 ntBASIC17.04■□□□□ 0.32
CDH11P55287 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH11P55287 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.04■□□□□ 0.32
CDH11P55287 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 CD177P1-201ENST00000606252 935 ntBASIC17.04■□□□□ 0.32
CDH11P55287 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH11P55287 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH11P55287 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH11P55287 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH11P55287 AC126763.1-201ENST00000552015 2118 ntBASIC17.03■□□□□ 0.32
CDH11P55287 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH11P55287 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 LTB4R2-202ENST00000528054 3092 ntBASIC17.03■□□□□ 0.32
CDH11P55287 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH11P55287 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH11P55287 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH11P55287 FAM197Y1-201ENST00000421178 764 ntBASIC17.03■□□□□ 0.32
CDH11P55287 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH11P55287 TSPY21P-201ENST00000433481 731 ntBASIC17.03■□□□□ 0.32
CDH11P55287 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH11P55287 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH11P55287 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH11P55287 AC073195.1-201ENST00000607241 877 ntBASIC17.03■□□□□ 0.32
CDH11P55287 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CDH11P55287 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH11P55287 REXO1L12P-201ENST00000622156 912 ntBASIC17.03■□□□□ 0.32
CDH11P55287 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CDH11P55287 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH11P55287 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH11P55287 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH11P55287 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH11P55287 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH11P55287 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH11P55287 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH11P55287 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH11P55287 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH11P55287 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH11P55287 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDH11P55287 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH11P55287 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH11P55287 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH11P55287 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH11P55287 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDH11P55287 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH11P55287 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH11P55287 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH11P55287 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH11P55287 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH11P55287 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH11P55287 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms