Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC4P55056 AC068587.9-201ENST00000641814 219 ntBASIC13.63□□□□□ -0.23
APOC4P55056 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC4P55056 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC4P55056 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC4P55056 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOC4P55056 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOC4P55056 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC4P55056 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
APOC4P55056 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.62□□□□□ -0.23
APOC4P55056 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 AP000593.1-201ENST00000393668 712 ntBASIC13.62□□□□□ -0.23
APOC4P55056 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC4P55056 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC4P55056 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.62□□□□□ -0.23
APOC4P55056 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
APOC4P55056 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APOC4P55056 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.62□□□□□ -0.23
APOC4P55056 AC010240.3-201ENST00000607688 395 ntBASIC13.62□□□□□ -0.23
APOC4P55056 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.62□□□□□ -0.23
APOC4P55056 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC4P55056 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC4P55056 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC4P55056 HEIH-201ENST00000623091 1652 ntBASIC13.62□□□□□ -0.23
APOC4P55056 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
APOC4P55056 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
APOC4P55056 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC4P55056 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
APOC4P55056 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
APOC4P55056 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
APOC4P55056 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APOC4P55056 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC4P55056 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
APOC4P55056 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC4P55056 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.61□□□□□ -0.23
APOC4P55056 FAM86EP-206ENST00000510506 987 ntBASIC13.61□□□□□ -0.23
APOC4P55056 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.61□□□□□ -0.23
APOC4P55056 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC4P55056 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC4P55056 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
APOC4P55056 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC4P55056 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
APOC4P55056 AC006333.2-201ENST00000607957 2099 ntBASIC13.6□□□□□ -0.23
APOC4P55056 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOC4P55056 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC4P55056 AC020763.4-201ENST00000623414 4170 ntBASIC13.6□□□□□ -0.23
APOC4P55056 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APOC4P55056 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 HBZP1-201ENST00000354915 429 ntBASIC13.6□□□□□ -0.23
APOC4P55056 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 AL645929.1-201ENST00000420084 975 ntBASIC13.6□□□□□ -0.23
APOC4P55056 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms