Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LIMK2P53671 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 KRT8P3-201ENST00000519669 1449 ntBASIC18.75■□□□□ 0.59
LIMK2P53671 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.75■□□□□ 0.59
LIMK2P53671 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LIMK2P53671 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LIMK2P53671 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.75■□□□□ 0.59
LIMK2P53671 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 TERF1P1-201ENST00000311003 1181 ntBASIC18.75■□□□□ 0.59
LIMK2P53671 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.75■□□□□ 0.59
LIMK2P53671 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LIMK2P53671 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LIMK2P53671 AL445228.2-201ENST00000605589 952 ntBASIC18.75■□□□□ 0.59
LIMK2P53671 AC130371.2-201ENST00000619443 611 ntBASIC18.75■□□□□ 0.59
LIMK2P53671 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
LIMK2P53671 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 AL499627.1-201ENST00000569373 2188 ntBASIC18.75■□□□□ 0.59
LIMK2P53671 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LIMK2P53671 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LIMK2P53671 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LIMK2P53671 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
LIMK2P53671 ABALON-201ENST00000629058 1903 ntBASIC18.74■□□□□ 0.59
LIMK2P53671 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LIMK2P53671 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.74■□□□□ 0.59
LIMK2P53671 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.74■□□□□ 0.59
LIMK2P53671 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 CRYGFP-201ENST00000418459 633 ntBASIC18.74■□□□□ 0.59
LIMK2P53671 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LIMK2P53671 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.74■□□□□ 0.59
LIMK2P53671 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.74■□□□□ 0.59
LIMK2P53671 KRT18P57-201ENST00000443599 1254 ntBASIC18.74■□□□□ 0.59
LIMK2P53671 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.74■□□□□ 0.59
LIMK2P53671 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LIMK2P53671 AL590326.2-201ENST00000625139 305 ntBASIC18.74■□□□□ 0.59
LIMK2P53671 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.74■□□□□ 0.59
LIMK2P53671 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.74■□□□□ 0.59
LIMK2P53671 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LIMK2P53671 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.74■□□□□ 0.59
LIMK2P53671 AC073508.3-201ENST00000619697 1419 ntBASIC18.74■□□□□ 0.59
LIMK2P53671 AC018470.1-201ENST00000624790 3129 ntBASIC18.74■□□□□ 0.59
LIMK2P53671 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 AL162741.1-201ENST00000565563 1558 ntBASIC18.73■□□□□ 0.59
LIMK2P53671 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 TSPY14P-201ENST00000303979 915 ntBASIC18.73■□□□□ 0.59
LIMK2P53671 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.73■□□□□ 0.59
LIMK2P53671 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LIMK2P53671 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.73■□□□□ 0.59
LIMK2P53671 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.73■□□□□ 0.59
LIMK2P53671 KRT18P35-201ENST00000510488 1269 ntBASIC18.73■□□□□ 0.59
LIMK2P53671 EGLN1P1-201ENST00000531623 762 ntBASIC18.73■□□□□ 0.59
LIMK2P53671 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.73■□□□□ 0.59
LIMK2P53671 AP000692.2-201ENST00000608391 879 ntBASIC18.73■□□□□ 0.59
LIMK2P53671 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.73■□□□□ 0.59
LIMK2P53671 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LIMK2P53671 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.72■□□□□ 0.59
LIMK2P53671 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.72■□□□□ 0.59
LIMK2P53671 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.72■□□□□ 0.59
LIMK2P53671 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms