Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.98■□□□□ 0.31
HMGA2P52926 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
HMGA2P52926 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.98■□□□□ 0.31
HMGA2P52926 AC233263.1-201ENST00000578059 224 ntBASIC16.98■□□□□ 0.31
HMGA2P52926 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.98■□□□□ 0.31
HMGA2P52926 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGA2P52926 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGA2P52926 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGA2P52926 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGA2P52926 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGA2P52926 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGA2P52926 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGA2P52926 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
HMGA2P52926 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HMGA2P52926 SIRPAP1-201ENST00000448467 1770 ntBASIC16.97■□□□□ 0.31
HMGA2P52926 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGA2P52926 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGA2P52926 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGA2P52926 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGA2P52926 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGA2P52926 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 KSR1P1-201ENST00000446298 240 ntBASIC16.97■□□□□ 0.31
HMGA2P52926 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGA2P52926 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGA2P52926 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGA2P52926 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
HMGA2P52926 AC130371.2-201ENST00000619443 611 ntBASIC16.97■□□□□ 0.31
HMGA2P52926 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGA2P52926 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGA2P52926 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGA2P52926 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HMGA2P52926 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HMGA2P52926 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HMGA2P52926 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HMGA2P52926 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HMGA2P52926 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 MIR564-202ENST00000385049 94 ntBASIC16.96■□□□□ 0.31
HMGA2P52926 AC239809.2-201ENST00000415381 517 ntBASIC16.96■□□□□ 0.31
HMGA2P52926 AC124016.1-201ENST00000609552 612 ntBASIC16.96■□□□□ 0.31
HMGA2P52926 AC110285.5-201ENST00000611501 352 ntBASIC16.96■□□□□ 0.31
HMGA2P52926 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.96■□□□□ 0.31
HMGA2P52926 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.96■□□□□ 0.31
HMGA2P52926 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HMGA2P52926 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HMGA2P52926 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 AL096828.2-201ENST00000567259 1965 ntBASIC16.96■□□□□ 0.31
HMGA2P52926 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HMGA2P52926 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGA2P52926 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
HMGA2P52926 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMGA2P52926 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMGA2P52926 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HMGA2P52926 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HMGA2P52926 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.95■□□□□ 0.3
HMGA2P52926 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGA2P52926 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMGA2P52926 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGA2P52926 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGA2P52926 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms