Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.32■□□□□ 0.84
CDR1P51861 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDR1P51861 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDR1P51861 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDR1P51861 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
CDR1P51861 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.32■□□□□ 0.84
CDR1P51861 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.32■□□□□ 0.84
CDR1P51861 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDR1P51861 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.32■□□□□ 0.84
CDR1P51861 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDR1P51861 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDR1P51861 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.31■□□□□ 0.84
CDR1P51861 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.31■□□□□ 0.84
CDR1P51861 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.31■□□□□ 0.84
CDR1P51861 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDR1P51861 ATP5G1P1-201ENST00000448724 379 ntBASIC20.31■□□□□ 0.84
CDR1P51861 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.31■□□□□ 0.84
CDR1P51861 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 AL049597.2-201ENST00000565575 961 ntBASIC20.31■□□□□ 0.84
CDR1P51861 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.31■□□□□ 0.84
CDR1P51861 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
CDR1P51861 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDR1P51861 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.31■□□□□ 0.84
CDR1P51861 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.31■□□□□ 0.84
CDR1P51861 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.3■□□□□ 0.84
CDR1P51861 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.3■□□□□ 0.84
CDR1P51861 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDR1P51861 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.3■□□□□ 0.84
CDR1P51861 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.3■□□□□ 0.84
CDR1P51861 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.3■□□□□ 0.84
CDR1P51861 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.3■□□□□ 0.84
CDR1P51861 LIN28AP1-201ENST00000429574 405 ntBASIC20.3■□□□□ 0.84
CDR1P51861 AC007663.1-201ENST00000438948 1240 ntBASIC20.3■□□□□ 0.84
CDR1P51861 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 KRT18P35-201ENST00000510488 1269 ntBASIC20.3■□□□□ 0.84
CDR1P51861 CKBP1-201ENST00000565489 1086 ntBASIC20.3■□□□□ 0.84
CDR1P51861 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDR1P51861 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.3■□□□□ 0.84
CDR1P51861 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.3■□□□□ 0.84
CDR1P51861 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDR1P51861 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.3■□□□□ 0.84
CDR1P51861 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDR1P51861 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.29■□□□□ 0.84
CDR1P51861 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CDR1P51861 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.29■□□□□ 0.84
CDR1P51861 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
CDR1P51861 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.29■□□□□ 0.84
CDR1P51861 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
CDR1P51861 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.29■□□□□ 0.84
CDR1P51861 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.29■□□□□ 0.84
CDR1P51861 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.29■□□□□ 0.84
CDR1P51861 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.29■□□□□ 0.84
CDR1P51861 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.29■□□□□ 0.84
CDR1P51861 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDR1P51861 AC006011.2-201ENST00000621313 1158 ntBASIC20.29■□□□□ 0.84
CDR1P51861 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDR1P51861 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.29■□□□□ 0.84
CDR1P51861 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDR1P51861 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.29■□□□□ 0.84
CDR1P51861 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CDR1P51861 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
CDR1P51861 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms