Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC1A6P48664 Z85996.1-201ENST00000494644 937 ntBASIC18.3■□□□□ 0.52
SLC1A6P48664 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.3■□□□□ 0.52
SLC1A6P48664 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A6P48664 REXO1L9P-201ENST00000604264 2108 ntBASIC18.3■□□□□ 0.52
SLC1A6P48664 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC1A6P48664 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A6P48664 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A6P48664 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A6P48664 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A6P48664 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A6P48664 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A6P48664 KRT8P3-201ENST00000519669 1449 ntBASIC18.3■□□□□ 0.52
SLC1A6P48664 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A6P48664 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SLC1A6P48664 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A6P48664 AC008556.1-201ENST00000610908 2040 ntBASIC18.3■□□□□ 0.52
SLC1A6P48664 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A6P48664 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A6P48664 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SLC1A6P48664 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SLC1A6P48664 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC1A6P48664 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SLC1A6P48664 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC1A6P48664 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.29■□□□□ 0.52
SLC1A6P48664 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC1A6P48664 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC1A6P48664 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SLC1A6P48664 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A6P48664 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
SLC1A6P48664 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC1A6P48664 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC1A6P48664 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC1A6P48664 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC1A6P48664 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SLC1A6P48664 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC1A6P48664 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC1A6P48664 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC1A6P48664 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC1A6P48664 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC1A6P48664 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
SLC1A6P48664 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC1A6P48664 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC1A6P48664 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC1A6P48664 AL138781.1-201ENST00000566567 1274 ntBASIC18.27■□□□□ 0.52
SLC1A6P48664 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC1A6P48664 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC1A6P48664 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
SLC1A6P48664 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC1A6P48664 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC1A6P48664 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A6P48664 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms