Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
HADHAP40939 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HADHAP40939 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.81■□□□□ 0.6
HADHAP40939 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.81■□□□□ 0.6
HADHAP40939 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 MIR1238-201ENST00000408483 83 ntBASIC18.81■□□□□ 0.6
HADHAP40939 SLC25A1P2-201ENST00000430693 912 ntBASIC18.81■□□□□ 0.6
HADHAP40939 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.81■□□□□ 0.6
HADHAP40939 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 AC068587.9-201ENST00000641814 219 ntBASIC18.81■□□□□ 0.6
HADHAP40939 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
HADHAP40939 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
HADHAP40939 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HADHAP40939 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HADHAP40939 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.8■□□□□ 0.6
HADHAP40939 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HADHAP40939 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.8■□□□□ 0.6
HADHAP40939 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.8■□□□□ 0.6
HADHAP40939 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.8■□□□□ 0.6
HADHAP40939 C2orf69P3-201ENST00000565542 1120 ntBASIC18.8■□□□□ 0.6
HADHAP40939 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
HADHAP40939 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.8■□□□□ 0.6
HADHAP40939 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 AL162741.1-201ENST00000565563 1558 ntBASIC18.8■□□□□ 0.6
HADHAP40939 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HADHAP40939 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.8■□□□□ 0.6
HADHAP40939 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HADHAP40939 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.79■□□□□ 0.6
HADHAP40939 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 CCR12P-201ENST00000446203 998 ntBASIC18.79■□□□□ 0.6
HADHAP40939 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.79■□□□□ 0.6
HADHAP40939 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.79■□□□□ 0.6
HADHAP40939 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.79■□□□□ 0.6
HADHAP40939 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.79■□□□□ 0.6
HADHAP40939 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.79■□□□□ 0.6
HADHAP40939 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.79■□□□□ 0.6
HADHAP40939 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HADHAP40939 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.79■□□□□ 0.6
HADHAP40939 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HADHAP40939 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
HADHAP40939 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HADHAP40939 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HADHAP40939 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.78■□□□□ 0.6
HADHAP40939 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HADHAP40939 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HADHAP40939 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HADHAP40939 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HADHAP40939 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HADHAP40939 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.78■□□□□ 0.6
HADHAP40939 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.78■□□□□ 0.6
HADHAP40939 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms