Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA3P32297 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CHRNA3P32297 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA3P32297 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNA3P32297 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CHRNA3P32297 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA3P32297 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA3P32297 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CHRNA3P32297 HEIH-201ENST00000623091 1652 ntBASIC19.6■□□□□ 0.73
CHRNA3P32297 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA3P32297 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHRNA3P32297 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA3P32297 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHRNA3P32297 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHRNA3P32297 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA3P32297 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
CHRNA3P32297 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA3P32297 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNA3P32297 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA3P32297 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRNA3P32297 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CHRNA3P32297 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNA3P32297 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CHRNA3P32297 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA3P32297 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CHRNA3P32297 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CHRNA3P32297 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA3P32297 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
CHRNA3P32297 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 AL390955.1-201ENST00000428694 934 ntBASIC19.59■□□□□ 0.73
CHRNA3P32297 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA3P32297 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA3P32297 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRNA3P32297 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRNA3P32297 FITM1-202ENST00000559294 800 ntBASIC19.59■□□□□ 0.73
CHRNA3P32297 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRNA3P32297 AC130371.2-201ENST00000619443 611 ntBASIC19.59■□□□□ 0.73
CHRNA3P32297 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CHRNA3P32297 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA3P32297 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNA3P32297 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNA3P32297 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.58■□□□□ 0.73
CHRNA3P32297 RCC2P6-201ENST00000526625 1557 ntBASIC19.58■□□□□ 0.73
CHRNA3P32297 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA3P32297 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRNA3P32297 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.58■□□□□ 0.72
CHRNA3P32297 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA3P32297 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA3P32297 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.58■□□□□ 0.72
CHRNA3P32297 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.58■□□□□ 0.72
CHRNA3P32297 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHRNA3P32297 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA3P32297 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA3P32297 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA3P32297 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA3P32297 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA3P32297 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHRNA3P32297 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA3P32297 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA3P32297 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CHRNA3P32297 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA3P32297 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA3P32297 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CHRNA3P32297 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA3P32297 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA3P32297 KRT8P9-201ENST00000558927 1449 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms