Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.27■□□□□ 0.51
VARSP26640 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
VARSP26640 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VARSP26640 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VARSP26640 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
VARSP26640 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VARSP26640 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
VARSP26640 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.26■□□□□ 0.51
VARSP26640 CKBP1-201ENST00000565489 1086 ntBASIC18.26■□□□□ 0.51
VARSP26640 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.26■□□□□ 0.51
VARSP26640 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
VARSP26640 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.26■□□□□ 0.51
VARSP26640 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VARSP26640 AC079598.2-202ENST00000546624 1451 ntBASIC18.26■□□□□ 0.51
VARSP26640 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.26■□□□□ 0.51
VARSP26640 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 AC135050.7-201ENST00000624508 2218 ntBASIC18.25■□□□□ 0.51
VARSP26640 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 AL139384.1-201ENST00000612143 3047 ntBASIC18.25■□□□□ 0.51
VARSP26640 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.25■□□□□ 0.51
VARSP26640 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.25■□□□□ 0.51
VARSP26640 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.25■□□□□ 0.51
VARSP26640 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.25■□□□□ 0.51
VARSP26640 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VARSP26640 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VARSP26640 KRT18P22-201ENST00000402024 1347 ntBASIC18.24■□□□□ 0.51
VARSP26640 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.24■□□□□ 0.51
VARSP26640 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
VARSP26640 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.24■□□□□ 0.51
VARSP26640 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.24■□□□□ 0.51
VARSP26640 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.24■□□□□ 0.51
VARSP26640 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.24■□□□□ 0.51
VARSP26640 SLC25A1P4-201ENST00000567977 778 ntBASIC18.24■□□□□ 0.51
VARSP26640 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VARSP26640 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.24■□□□□ 0.51
VARSP26640 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.24■□□□□ 0.51
VARSP26640 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.24■□□□□ 0.51
VARSP26640 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.24■□□□□ 0.51
VARSP26640 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.24■□□□□ 0.51
VARSP26640 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VARSP26640 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
VARSP26640 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.23■□□□□ 0.51
VARSP26640 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.23■□□□□ 0.51
VARSP26640 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms