Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN3P26045 KRT8P50-201ENST00000562022 1438 ntBASIC18.94■□□□□ 0.62
PTPN3P26045 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTPN3P26045 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN3P26045 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN3P26045 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN3P26045 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN3P26045 NAPSB-206ENST00000562112 1266 ntBASIC18.94■□□□□ 0.62
PTPN3P26045 WWOX-216ENST00000569818 525 ntBASIC18.94■□□□□ 0.62
PTPN3P26045 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
PTPN3P26045 AC010653.2-201ENST00000623505 997 ntBASIC18.94■□□□□ 0.62
PTPN3P26045 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTPN3P26045 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN3P26045 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN3P26045 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PTPN3P26045 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN3P26045 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN3P26045 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PTPN3P26045 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN3P26045 AP000593.1-201ENST00000393668 712 ntBASIC18.93■□□□□ 0.62
PTPN3P26045 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN3P26045 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN3P26045 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PTPN3P26045 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN3P26045 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN3P26045 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTPN3P26045 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN3P26045 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.92■□□□□ 0.62
PTPN3P26045 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTPN3P26045 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN3P26045 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.92■□□□□ 0.62
PTPN3P26045 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN3P26045 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPN3P26045 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PTPN3P26045 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN3P26045 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN3P26045 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN3P26045 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PTPN3P26045 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PTPN3P26045 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.91■□□□□ 0.62
PTPN3P26045 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPN3P26045 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPN3P26045 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPN3P26045 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 AL354751.1-201ENST00000412768 1863 ntBASIC18.91■□□□□ 0.62
PTPN3P26045 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN3P26045 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms