Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.23■□□□□ 0.83
RFX1P22670 AC009113.1-201ENST00000570267 2443 ntBASIC20.23■□□□□ 0.83
RFX1P22670 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFX1P22670 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 HMGA1P5-201ENST00000412453 271 ntBASIC20.23■□□□□ 0.83
RFX1P22670 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.23■□□□□ 0.83
RFX1P22670 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.23■□□□□ 0.83
RFX1P22670 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.23■□□□□ 0.83
RFX1P22670 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.23■□□□□ 0.83
RFX1P22670 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.23■□□□□ 0.83
RFX1P22670 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.23■□□□□ 0.83
RFX1P22670 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RFX1P22670 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFX1P22670 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX1P22670 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFX1P22670 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.23■□□□□ 0.83
RFX1P22670 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.23■□□□□ 0.83
RFX1P22670 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.22■□□□□ 0.83
RFX1P22670 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
RFX1P22670 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RFX1P22670 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.22■□□□□ 0.83
RFX1P22670 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.22■□□□□ 0.83
RFX1P22670 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 RNF152P1-201ENST00000397754 604 ntBASIC20.22■□□□□ 0.83
RFX1P22670 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.22■□□□□ 0.83
RFX1P22670 AC093458.2-201ENST00000623150 629 ntBASIC20.22■□□□□ 0.83
RFX1P22670 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
RFX1P22670 AP000550.4-202ENST00000639755 178 ntBASIC20.22■□□□□ 0.83
RFX1P22670 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.22■□□□□ 0.83
RFX1P22670 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFX1P22670 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
RFX1P22670 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RFX1P22670 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.21■□□□□ 0.83
RFX1P22670 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.21■□□□□ 0.83
RFX1P22670 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.21■□□□□ 0.83
RFX1P22670 AC117947.1-201ENST00000427448 529 ntBASIC20.21■□□□□ 0.83
RFX1P22670 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.21■□□□□ 0.83
RFX1P22670 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.21■□□□□ 0.83
RFX1P22670 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.21■□□□□ 0.83
RFX1P22670 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RFX1P22670 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.21■□□□□ 0.83
RFX1P22670 AC139887.4-201ENST00000607877 719 ntBASIC20.21■□□□□ 0.83
RFX1P22670 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.21■□□□□ 0.83
RFX1P22670 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.21■□□□□ 0.83
RFX1P22670 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.21■□□□□ 0.83
RFX1P22670 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.21■□□□□ 0.83
RFX1P22670 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFX1P22670 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RFX1P22670 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.2■□□□□ 0.82
RFX1P22670 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.2■□□□□ 0.82
RFX1P22670 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFX1P22670 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.2■□□□□ 0.82
RFX1P22670 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RFX1P22670 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.2■□□□□ 0.82
RFX1P22670 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.2■□□□□ 0.82
RFX1P22670 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.2■□□□□ 0.82
RFX1P22670 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.2■□□□□ 0.82
RFX1P22670 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms