Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.67■□□□□ 0.58
CTPS1P17812 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTPS1P17812 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.67■□□□□ 0.58
CTPS1P17812 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTPS1P17812 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.67■□□□□ 0.58
CTPS1P17812 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.67■□□□□ 0.58
CTPS1P17812 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.67■□□□□ 0.58
CTPS1P17812 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.67■□□□□ 0.58
CTPS1P17812 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.67■□□□□ 0.58
CTPS1P17812 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.67■□□□□ 0.58
CTPS1P17812 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.67■□□□□ 0.58
CTPS1P17812 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
CTPS1P17812 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.67■□□□□ 0.58
CTPS1P17812 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTPS1P17812 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.66■□□□□ 0.58
CTPS1P17812 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CTPS1P17812 AP000523.1-201ENST00000398242 1049 ntBASIC18.66■□□□□ 0.58
CTPS1P17812 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CTPS1P17812 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.66■□□□□ 0.58
CTPS1P17812 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 DUX4L26-201ENST00000489078 1255 ntBASIC18.66■□□□□ 0.58
CTPS1P17812 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.66■□□□□ 0.58
CTPS1P17812 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.66■□□□□ 0.58
CTPS1P17812 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTPS1P17812 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CTPS1P17812 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTPS1P17812 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CTPS1P17812 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.65■□□□□ 0.58
CTPS1P17812 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTPS1P17812 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTPS1P17812 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.65■□□□□ 0.58
CTPS1P17812 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.65■□□□□ 0.58
CTPS1P17812 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTPS1P17812 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTPS1P17812 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CTPS1P17812 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 AC005082.1-201ENST00000413042 2259 ntBASIC18.65■□□□□ 0.58
CTPS1P17812 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.65■□□□□ 0.58
CTPS1P17812 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTPS1P17812 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CTPS1P17812 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.64■□□□□ 0.58
CTPS1P17812 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.64■□□□□ 0.58
CTPS1P17812 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CTPS1P17812 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CTPS1P17812 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.64■□□□□ 0.57
CTPS1P17812 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.64■□□□□ 0.57
CTPS1P17812 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CTPS1P17812 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CTPS1P17812 RNF152P1-201ENST00000397754 604 ntBASIC18.64■□□□□ 0.57
CTPS1P17812 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.64■□□□□ 0.57
CTPS1P17812 TSPY5P-201ENST00000426936 936 ntBASIC18.64■□□□□ 0.57
CTPS1P17812 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.64■□□□□ 0.57
CTPS1P17812 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 SEC1P-202ENST00000473944 940 ntBASIC18.64■□□□□ 0.57
CTPS1P17812 AL049597.2-201ENST00000565575 961 ntBASIC18.64■□□□□ 0.57
CTPS1P17812 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.64■□□□□ 0.57
CTPS1P17812 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CTPS1P17812 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 AL031432.5-201ENST00000641059 760 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms