Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMPD1P17405 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.66■□□□□ 0.9
SMPD1P17405 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SMPD1P17405 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SMPD1P17405 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 AL022342.1-201ENST00000400363 863 ntBASIC20.66■□□□□ 0.9
SMPD1P17405 NUS1P2-201ENST00000417358 873 ntBASIC20.66■□□□□ 0.9
SMPD1P17405 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.66■□□□□ 0.9
SMPD1P17405 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.66■□□□□ 0.9
SMPD1P17405 VENTXP7-201ENST00000475503 772 ntBASIC20.66■□□□□ 0.9
SMPD1P17405 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.66■□□□□ 0.9
SMPD1P17405 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.66■□□□□ 0.9
SMPD1P17405 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SMPD1P17405 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.66■□□□□ 0.9
SMPD1P17405 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.66■□□□□ 0.9
SMPD1P17405 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SMPD1P17405 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SMPD1P17405 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMPD1P17405 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SMPD1P17405 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.65■□□□□ 0.9
SMPD1P17405 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.65■□□□□ 0.9
SMPD1P17405 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.65■□□□□ 0.9
SMPD1P17405 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.65■□□□□ 0.9
SMPD1P17405 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.65■□□□□ 0.9
SMPD1P17405 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.65■□□□□ 0.9
SMPD1P17405 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.65■□□□□ 0.9
SMPD1P17405 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMPD1P17405 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMPD1P17405 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMPD1P17405 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMPD1P17405 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.64■□□□□ 0.89
SMPD1P17405 AC079776.4-201ENST00000511039 504 ntBASIC20.64■□□□□ 0.89
SMPD1P17405 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 AC011840.4-201ENST00000578471 627 ntBASIC20.64■□□□□ 0.89
SMPD1P17405 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMPD1P17405 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.64■□□□□ 0.89
SMPD1P17405 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.64■□□□□ 0.89
SMPD1P17405 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SMPD1P17405 REXO1L6P-202ENST00000619970 1078 ntBASIC20.64■□□□□ 0.89
SMPD1P17405 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.64■□□□□ 0.89
SMPD1P17405 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.64■□□□□ 0.89
SMPD1P17405 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMPD1P17405 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMPD1P17405 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SMPD1P17405 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SMPD1P17405 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.63■□□□□ 0.89
SMPD1P17405 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.63■□□□□ 0.89
SMPD1P17405 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 AP000593.1-201ENST00000393668 712 ntBASIC20.63■□□□□ 0.89
SMPD1P17405 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMPD1P17405 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.63■□□□□ 0.89
SMPD1P17405 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.63■□□□□ 0.89
SMPD1P17405 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms