Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SP9P0CG40 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SP9P0CG40 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SP9P0CG40 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP9P0CG40 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
SP9P0CG40 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP9P0CG40 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP9P0CG40 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP9P0CG40 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP9P0CG40 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SP9P0CG40 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.26■□□□□ 0.51
SP9P0CG40 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SP9P0CG40 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SP9P0CG40 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.26■□□□□ 0.51
SP9P0CG40 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.26■□□□□ 0.51
SP9P0CG40 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.26■□□□□ 0.51
SP9P0CG40 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.26■□□□□ 0.51
SP9P0CG40 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SP9P0CG40 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.26■□□□□ 0.51
SP9P0CG40 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.26■□□□□ 0.51
SP9P0CG40 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SP9P0CG40 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SP9P0CG40 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 Z82202.1-201ENST00000623446 1880 ntBASIC18.25■□□□□ 0.51
SP9P0CG40 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.25■□□□□ 0.51
SP9P0CG40 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SP9P0CG40 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 FAM8A3P-201ENST00000427218 844 ntBASIC18.25■□□□□ 0.51
SP9P0CG40 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.25■□□□□ 0.51
SP9P0CG40 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.25■□□□□ 0.51
SP9P0CG40 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.25■□□□□ 0.51
SP9P0CG40 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.25■□□□□ 0.51
SP9P0CG40 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.25■□□□□ 0.51
SP9P0CG40 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.25■□□□□ 0.51
SP9P0CG40 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SP9P0CG40 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SP9P0CG40 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SP9P0CG40 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SP9P0CG40 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.25■□□□□ 0.51
SP9P0CG40 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SP9P0CG40 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.24■□□□□ 0.51
SP9P0CG40 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.24■□□□□ 0.51
SP9P0CG40 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SP9P0CG40 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SP9P0CG40 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.24■□□□□ 0.51
SP9P0CG40 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SP9P0CG40 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP9P0CG40 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP9P0CG40 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.24■□□□□ 0.51
SP9P0CG40 AC068472.1-201ENST00000474589 881 ntBASIC18.24■□□□□ 0.51
SP9P0CG40 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.24■□□□□ 0.51
SP9P0CG40 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.24■□□□□ 0.51
SP9P0CG40 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
SP9P0CG40 AC011467.2-201ENST00000598425 242 ntBASIC18.24■□□□□ 0.51
SP9P0CG40 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP9P0CG40 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP9P0CG40 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.24■□□□□ 0.51
SP9P0CG40 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.24■□□□□ 0.51
SP9P0CG40 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SP9P0CG40 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.23■□□□□ 0.51
SP9P0CG40 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.23■□□□□ 0.51
SP9P0CG40 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SP9P0CG40 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SP9P0CG40 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.23■□□□□ 0.51
SP9P0CG40 AP002414.3-201ENST00000589352 1468 ntBASIC18.23■□□□□ 0.51
SP9P0CG40 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.23■□□□□ 0.51
SP9P0CG40 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.23■□□□□ 0.51
SP9P0CG40 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.23■□□□□ 0.51
SP9P0CG40 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.23■□□□□ 0.51
SP9P0CG40 AC244107.1-201ENST00000442033 332 ntBASIC18.23■□□□□ 0.51
SP9P0CG40 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.23■□□□□ 0.51
SP9P0CG40 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.23■□□□□ 0.51
SP9P0CG40 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.23■□□□□ 0.51
SP9P0CG40 SNHG9-202ENST00000564014 471 ntBASIC18.23■□□□□ 0.51
SP9P0CG40 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.23■□□□□ 0.51
SP9P0CG40 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SP9P0CG40 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP9P0CG40 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP9P0CG40 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SP9P0CG40 TEX21P-204ENST00000641479 1693 ntBASIC18.22■□□□□ 0.51
SP9P0CG40 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms