Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 PRORSD1P-201ENST00000295112 541 ntBASIC16.96■□□□□ 0.31
HIST1H2ABP04908 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 B3GAT3P1-201ENST00000471720 806 ntBASIC16.96■□□□□ 0.31
HIST1H2ABP04908 AC011506.1-201ENST00000474329 610 ntBASIC16.96■□□□□ 0.31
HIST1H2ABP04908 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST1H2ABP04908 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H2ABP04908 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.96■□□□□ 0.3
HIST1H2ABP04908 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H2ABP04908 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
HIST1H2ABP04908 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HIST1H2ABP04908 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 AC005332.8-201ENST00000622750 2735 ntBASIC16.95■□□□□ 0.3
HIST1H2ABP04908 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 MYC-208ENST00000641036 567 ntBASIC16.95■□□□□ 0.3
HIST1H2ABP04908 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 CROCCP1-201ENST00000426910 5675 ntBASIC16.95■□□□□ 0.3
HIST1H2ABP04908 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.95■□□□□ 0.3
HIST1H2ABP04908 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 KRT8P32-201ENST00000512863 1461 ntBASIC16.94■□□□□ 0.3
HIST1H2ABP04908 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 AC008040.2-201ENST00000461049 708 ntBASIC16.94■□□□□ 0.3
HIST1H2ABP04908 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 AC068587.9-201ENST00000641814 219 ntBASIC16.94■□□□□ 0.3
HIST1H2ABP04908 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 AC104581.1-202ENST00000635932 2618 ntBASIC16.94■□□□□ 0.3
HIST1H2ABP04908 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HIST1H2ABP04908 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2ABP04908 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2ABP04908 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.93■□□□□ 0.3
HIST1H2ABP04908 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2ABP04908 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2ABP04908 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2ABP04908 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2ABP04908 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms