Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.98■□□□□ 0.31
P04436 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.97■□□□□ 0.31
P04436 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.97■□□□□ 0.31
P04436 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.97■□□□□ 0.31
P04436 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.97■□□□□ 0.31
P04436 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 AL136038.3-201ENST00000561909 1096 ntBASIC16.97■□□□□ 0.31
P04436 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.97■□□□□ 0.31
P04436 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.97■□□□□ 0.31
P04436 AC083849.1-201ENST00000615227 514 ntBASIC16.97■□□□□ 0.31
P04436 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.97■□□□□ 0.31
P04436 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.97■□□□□ 0.31
P04436 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
P04436 IER3-202ENST00000376377 1350 ntBASIC16.97■□□□□ 0.31
P04436 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P04436 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
P04436 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.97■□□□□ 0.31
P04436 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
P04436 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.97■□□□□ 0.31
P04436 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.97■□□□□ 0.31
P04436 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04436 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
P04436 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.96■□□□□ 0.31
P04436 MTMR9LP-203ENST00000426597 1545 ntBASIC16.96■□□□□ 0.31
P04436 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.96■□□□□ 0.31
P04436 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.96■□□□□ 0.31
P04436 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
P04436 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 HBZP1-201ENST00000354915 429 ntBASIC16.96■□□□□ 0.31
P04436 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 AC092597.1-201ENST00000487352 616 ntBASIC16.96■□□□□ 0.31
P04436 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.96■□□□□ 0.31
P04436 MIR3180-4-201ENST00000582223 153 ntBASIC16.96■□□□□ 0.31
P04436 HYMAI.1-201ENST00000620949 238 ntBASIC16.96■□□□□ 0.31
P04436 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.96■□□□□ 0.31
P04436 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.96■□□□□ 0.31
P04436 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
P04436 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04436 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
P04436 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.96■□□□□ 0.3
P04436 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
P04436 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
P04436 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
P04436 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
P04436 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
P04436 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
P04436 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
P04436 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
P04436 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.95■□□□□ 0.3
P04436 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 AP000593.1-201ENST00000393668 712 ntBASIC16.95■□□□□ 0.3
P04436 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.95■□□□□ 0.3
P04436 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.95■□□□□ 0.3
P04436 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.95■□□□□ 0.3
P04436 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
P04436 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
P04436 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms