Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE6O95741 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE6O95741 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE6O95741 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CPNE6O95741 VENTXP5-201ENST00000523979 775 ntBASIC18.23■□□□□ 0.51
CPNE6O95741 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CPNE6O95741 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE6O95741 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CPNE6O95741 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE6O95741 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CPNE6O95741 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.23■□□□□ 0.51
CPNE6O95741 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CPNE6O95741 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE6O95741 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
CPNE6O95741 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE6O95741 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.22■□□□□ 0.51
CPNE6O95741 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE6O95741 ZNF444P1-201ENST00000559497 298 ntBASIC18.22■□□□□ 0.51
CPNE6O95741 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE6O95741 AL032819.2-201ENST00000624543 2162 ntBASIC18.22■□□□□ 0.51
CPNE6O95741 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 AL390961.4-201ENST00000623958 2535 ntBASIC18.22■□□□□ 0.51
CPNE6O95741 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE6O95741 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE6O95741 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CPNE6O95741 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE6O95741 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CPNE6O95741 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE6O95741 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CPNE6O95741 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CPNE6O95741 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE6O95741 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.21■□□□□ 0.51
CPNE6O95741 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CPNE6O95741 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 KRT18P56-201ENST00000507275 550 ntBASIC18.21■□□□□ 0.51
CPNE6O95741 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE6O95741 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.21■□□□□ 0.51
CPNE6O95741 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
CPNE6O95741 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.21■□□□□ 0.51
CPNE6O95741 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.21■□□□□ 0.51
CPNE6O95741 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.21■□□□□ 0.51
CPNE6O95741 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE6O95741 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
CPNE6O95741 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
CPNE6O95741 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CPNE6O95741 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE6O95741 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPNE6O95741 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE6O95741 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE6O95741 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CPNE6O95741 GPAT2P1-201ENST00000444924 1672 ntBASIC18.2■□□□□ 0.5
CPNE6O95741 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms