Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX2-2O95096 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NKX2-2O95096 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NKX2-2O95096 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX2-2O95096 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.15■□□□□ 0.34
NKX2-2O95096 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.15■□□□□ 0.34
NKX2-2O95096 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
NKX2-2O95096 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NKX2-2O95096 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.15■□□□□ 0.34
NKX2-2O95096 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.14■□□□□ 0.34
NKX2-2O95096 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 NEFHP1-201ENST00000412845 2629 ntBASIC17.14■□□□□ 0.33
NKX2-2O95096 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
NKX2-2O95096 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NKX2-2O95096 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX2-2O95096 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.14■□□□□ 0.33
NKX2-2O95096 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX2-2O95096 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX2-2O95096 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX2-2O95096 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.14■□□□□ 0.33
NKX2-2O95096 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NKX2-2O95096 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 AL162741.1-201ENST00000565563 1558 ntBASIC17.14■□□□□ 0.33
NKX2-2O95096 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NKX2-2O95096 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NKX2-2O95096 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NKX2-2O95096 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX2-2O95096 AC135050.7-201ENST00000624508 2218 ntBASIC17.13■□□□□ 0.33
NKX2-2O95096 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 AL163051.1-201ENST00000569214 1512 ntBASIC17.13■□□□□ 0.33
NKX2-2O95096 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.13■□□□□ 0.33
NKX2-2O95096 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.13■□□□□ 0.33
NKX2-2O95096 AC009947.2-201ENST00000444014 672 ntBASIC17.13■□□□□ 0.33
NKX2-2O95096 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX2-2O95096 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 AC104390.1-201ENST00000555663 520 ntBASIC17.13■□□□□ 0.33
NKX2-2O95096 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX2-2O95096 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.13■□□□□ 0.33
NKX2-2O95096 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NKX2-2O95096 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NKX2-2O95096 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 RNF165-205ENST00000588679 2904 ntBASIC17.13■□□□□ 0.33
NKX2-2O95096 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NKX2-2O95096 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NKX2-2O95096 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NKX2-2O95096 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NKX2-2O95096 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX2-2O95096 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NKX2-2O95096 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX2-2O95096 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NKX2-2O95096 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.12■□□□□ 0.33
NKX2-2O95096 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX2-2O95096 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.12■□□□□ 0.33
NKX2-2O95096 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.12■□□□□ 0.33
NKX2-2O95096 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX2-2O95096 NEK4P2-201ENST00000580004 1012 ntBASIC17.12■□□□□ 0.33
NKX2-2O95096 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX2-2O95096 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NKX2-2O95096 AC012306.2-201ENST00000609350 630 ntBASIC17.12■□□□□ 0.33
NKX2-2O95096 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms