Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCN2BO60939 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.65■□□□□ 0.42
SCN2BO60939 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 FAM207BP-201ENST00000447172 505 ntBASIC17.65■□□□□ 0.42
SCN2BO60939 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN2BO60939 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCN2BO60939 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN2BO60939 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 MIR6786-201ENST00000616843 113 ntBASIC17.65■□□□□ 0.42
SCN2BO60939 AL359736.2-201ENST00000621992 437 ntBASIC17.65■□□□□ 0.42
SCN2BO60939 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SCN2BO60939 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
SCN2BO60939 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCN2BO60939 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCN2BO60939 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SCN2BO60939 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SCN2BO60939 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SCN2BO60939 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.64■□□□□ 0.41
SCN2BO60939 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.64■□□□□ 0.41
SCN2BO60939 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCN2BO60939 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCN2BO60939 KRT18P41-201ENST00000518924 1277 ntBASIC17.64■□□□□ 0.41
SCN2BO60939 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SCN2BO60939 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.64■□□□□ 0.41
SCN2BO60939 AP000692.2-201ENST00000608391 879 ntBASIC17.64■□□□□ 0.41
SCN2BO60939 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 AC008622.2-201ENST00000617006 1229 ntBASIC17.64■□□□□ 0.41
SCN2BO60939 MYC-208ENST00000641036 567 ntBASIC17.64■□□□□ 0.41
SCN2BO60939 AC135776.1-201ENST00000319817 2481 ntBASIC17.64■□□□□ 0.41
SCN2BO60939 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCN2BO60939 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.63■□□□□ 0.41
SCN2BO60939 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN2BO60939 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN2BO60939 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN2BO60939 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SCN2BO60939 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.63■□□□□ 0.41
SCN2BO60939 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SCN2BO60939 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SCN2BO60939 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.63■□□□□ 0.41
SCN2BO60939 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN2BO60939 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SCN2BO60939 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN2BO60939 AL109659.2-201ENST00000606809 1674 ntBASIC17.63■□□□□ 0.41
SCN2BO60939 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
SCN2BO60939 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.63■□□□□ 0.41
SCN2BO60939 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.63■□□□□ 0.41
SCN2BO60939 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCN2BO60939 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.63■□□□□ 0.41
SCN2BO60939 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SCN2BO60939 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SCN2BO60939 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.62■□□□□ 0.41
SCN2BO60939 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.62■□□□□ 0.41
SCN2BO60939 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.62■□□□□ 0.41
SCN2BO60939 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SCN2BO60939 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCN2BO60939 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.62■□□□□ 0.41
SCN2BO60939 AC008556.1-201ENST00000610908 2040 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms