Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ARMC10P1-201ENST00000313754 855 ntBASIC23.34■■□□□ 1.33
CACNA1FO60840 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CACNA1FO60840 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CACNA1FO60840 UPK3BP1-201ENST00000428678 509 ntBASIC23.34■■□□□ 1.33
CACNA1FO60840 TPSP2-201ENST00000561760 610 ntBASIC23.34■■□□□ 1.33
CACNA1FO60840 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.34■■□□□ 1.33
CACNA1FO60840 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.34■■□□□ 1.33
CACNA1FO60840 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CACNA1FO60840 AC093010.1-201ENST00000473625 1624 ntBASIC23.34■■□□□ 1.33
CACNA1FO60840 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.33■■□□□ 1.33
CACNA1FO60840 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CACNA1FO60840 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.33■■□□□ 1.33
CACNA1FO60840 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CACNA1FO60840 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.33■■□□□ 1.33
CACNA1FO60840 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CACNA1FO60840 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CACNA1FO60840 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.33■■□□□ 1.33
CACNA1FO60840 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.33■■□□□ 1.33
CACNA1FO60840 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.33■■□□□ 1.33
CACNA1FO60840 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CACNA1FO60840 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.33■■□□□ 1.33
CACNA1FO60840 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CACNA1FO60840 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CACNA1FO60840 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CACNA1FO60840 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CACNA1FO60840 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.32■■□□□ 1.32
CACNA1FO60840 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CACNA1FO60840 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.32■■□□□ 1.32
CACNA1FO60840 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.32■■□□□ 1.32
CACNA1FO60840 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.32■■□□□ 1.32
CACNA1FO60840 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.32■■□□□ 1.32
CACNA1FO60840 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.32■■□□□ 1.32
CACNA1FO60840 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.32■■□□□ 1.32
CACNA1FO60840 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.32■■□□□ 1.32
CACNA1FO60840 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.32■■□□□ 1.32
CACNA1FO60840 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CACNA1FO60840 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
CACNA1FO60840 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.31■■□□□ 1.32
CACNA1FO60840 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CACNA1FO60840 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CACNA1FO60840 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CACNA1FO60840 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.31■■□□□ 1.32
CACNA1FO60840 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.31■■□□□ 1.32
CACNA1FO60840 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.31■■□□□ 1.32
CACNA1FO60840 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.31■■□□□ 1.32
CACNA1FO60840 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.31■■□□□ 1.32
CACNA1FO60840 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.31■■□□□ 1.32
CACNA1FO60840 IGHGP-201ENST00000390555 1178 ntBASIC23.31■■□□□ 1.32
CACNA1FO60840 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.31■■□□□ 1.32
CACNA1FO60840 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CACNA1FO60840 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.31■■□□□ 1.32
CACNA1FO60840 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.31■■□□□ 1.32
CACNA1FO60840 AL390719.2-201ENST00000606993 987 ntBASIC23.31■■□□□ 1.32
CACNA1FO60840 AL121672.3-201ENST00000608644 468 ntBASIC23.31■■□□□ 1.32
CACNA1FO60840 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.31■■□□□ 1.32
CACNA1FO60840 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.3■■□□□ 1.32
CACNA1FO60840 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.3■■□□□ 1.32
CACNA1FO60840 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.3■■□□□ 1.32
CACNA1FO60840 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.3■■□□□ 1.32
CACNA1FO60840 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.3■■□□□ 1.32
CACNA1FO60840 IER3-202ENST00000376377 1350 ntBASIC23.3■■□□□ 1.32
CACNA1FO60840 GMCL1P1-201ENST00000463439 1581 ntBASIC23.3■■□□□ 1.32
CACNA1FO60840 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CACNA1FO60840 AL138781.2-201ENST00000617896 1843 ntBASIC23.29■■□□□ 1.32
CACNA1FO60840 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CACNA1FO60840 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CACNA1FO60840 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CACNA1FO60840 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
CACNA1FO60840 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CACNA1FO60840 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CACNA1FO60840 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CACNA1FO60840 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CACNA1FO60840 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CACNA1FO60840 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms