Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.25■□□□□ 0.51
DLX3O60479 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DLX3O60479 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DLX3O60479 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.24■□□□□ 0.51
DLX3O60479 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.24■□□□□ 0.51
DLX3O60479 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
DLX3O60479 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
DLX3O60479 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.24■□□□□ 0.51
DLX3O60479 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.24■□□□□ 0.51
DLX3O60479 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.24■□□□□ 0.51
DLX3O60479 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 AL353807.1-201ENST00000427475 662 ntBASIC18.24■□□□□ 0.51
DLX3O60479 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.24■□□□□ 0.51
DLX3O60479 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.24■□□□□ 0.51
DLX3O60479 KRT18P41-201ENST00000518924 1277 ntBASIC18.24■□□□□ 0.51
DLX3O60479 C1QBPP2-201ENST00000528754 825 ntBASIC18.24■□□□□ 0.51
DLX3O60479 AF186192.3-201ENST00000583427 947 ntBASIC18.24■□□□□ 0.51
DLX3O60479 AC008622.2-201ENST00000617006 1229 ntBASIC18.24■□□□□ 0.51
DLX3O60479 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
DLX3O60479 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
DLX3O60479 AL109659.2-201ENST00000606809 1674 ntBASIC18.24■□□□□ 0.51
DLX3O60479 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.24■□□□□ 0.51
DLX3O60479 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DLX3O60479 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.23■□□□□ 0.51
DLX3O60479 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DLX3O60479 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DLX3O60479 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DLX3O60479 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.23■□□□□ 0.51
DLX3O60479 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.23■□□□□ 0.51
DLX3O60479 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DLX3O60479 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.23■□□□□ 0.51
DLX3O60479 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DLX3O60479 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DLX3O60479 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DLX3O60479 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.22■□□□□ 0.51
DLX3O60479 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.22■□□□□ 0.51
DLX3O60479 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.22■□□□□ 0.51
DLX3O60479 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.22■□□□□ 0.51
DLX3O60479 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
DLX3O60479 B3GAT3P1-201ENST00000471720 806 ntBASIC18.22■□□□□ 0.51
DLX3O60479 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.22■□□□□ 0.51
DLX3O60479 RPPH1-201ENST00000516869 333 ntBASIC18.22■□□□□ 0.51
DLX3O60479 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.22■□□□□ 0.51
DLX3O60479 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.22■□□□□ 0.51
DLX3O60479 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.22■□□□□ 0.51
DLX3O60479 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.22■□□□□ 0.51
DLX3O60479 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.22■□□□□ 0.51
DLX3O60479 AC073195.1-201ENST00000607241 877 ntBASIC18.22■□□□□ 0.51
DLX3O60479 MIR6786-201ENST00000616843 113 ntBASIC18.22■□□□□ 0.51
DLX3O60479 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DLX3O60479 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DLX3O60479 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DLX3O60479 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms