Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.64■□□□□ 0.25
CXCL13O43927 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCL13O43927 KRT18P35-201ENST00000510488 1269 ntBASIC16.64■□□□□ 0.25
CXCL13O43927 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCL13O43927 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.64■□□□□ 0.25
CXCL13O43927 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCL13O43927 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.64■□□□□ 0.25
CXCL13O43927 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.64■□□□□ 0.25
CXCL13O43927 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.64■□□□□ 0.25
CXCL13O43927 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CXCL13O43927 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCL13O43927 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CXCL13O43927 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCL13O43927 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCL13O43927 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CXCL13O43927 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 AC098818.2-201ENST00000564925 2320 ntBASIC16.63■□□□□ 0.25
CXCL13O43927 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.63■□□□□ 0.25
CXCL13O43927 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CXCL13O43927 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.63■□□□□ 0.25
CXCL13O43927 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCL13O43927 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCL13O43927 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCL13O43927 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCL13O43927 KRT18P38-201ENST00000449496 1282 ntBASIC16.63■□□□□ 0.25
CXCL13O43927 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.63■□□□□ 0.25
CXCL13O43927 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 AL445228.2-201ENST00000605589 952 ntBASIC16.63■□□□□ 0.25
CXCL13O43927 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CXCL13O43927 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.63■□□□□ 0.25
CXCL13O43927 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCL13O43927 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.63■□□□□ 0.25
CXCL13O43927 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CXCL13O43927 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCL13O43927 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CXCL13O43927 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.62■□□□□ 0.25
CXCL13O43927 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.62■□□□□ 0.25
CXCL13O43927 ARMC10P1-201ENST00000313754 855 ntBASIC16.62■□□□□ 0.25
CXCL13O43927 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.62■□□□□ 0.25
CXCL13O43927 AC034232.1-201ENST00000506026 1064 ntBASIC16.62■□□□□ 0.25
CXCL13O43927 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.62■□□□□ 0.25
CXCL13O43927 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 AC104390.1-201ENST00000555663 520 ntBASIC16.62■□□□□ 0.25
CXCL13O43927 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.62■□□□□ 0.25
CXCL13O43927 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.62■□□□□ 0.25
CXCL13O43927 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.62■□□□□ 0.25
CXCL13O43927 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CXCL13O43927 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.62■□□□□ 0.25
CXCL13O43927 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCL13O43927 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXCL13O43927 BX323043.1-201ENST00000641006 1765 ntBASIC16.61■□□□□ 0.25
CXCL13O43927 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.61■□□□□ 0.25
CXCL13O43927 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCL13O43927 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CXCL13O43927 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.61■□□□□ 0.25
CXCL13O43927 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCL13O43927 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXCL13O43927 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CXCL13O43927 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CXCL13O43927 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CXCL13O43927 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.61■□□□□ 0.25
CXCL13O43927 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXCL13O43927 STARP1-201ENST00000397973 869 ntBASIC16.61■□□□□ 0.25
CXCL13O43927 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.61■□□□□ 0.25
CXCL13O43927 SPDYE15P-201ENST00000424157 909 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms