Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PFDN6O15212 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.63■□□□□ 0.57
PFDN6O15212 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PFDN6O15212 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.63■□□□□ 0.57
PFDN6O15212 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PFDN6O15212 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PFDN6O15212 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PFDN6O15212 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.62■□□□□ 0.57
PFDN6O15212 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PFDN6O15212 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
PFDN6O15212 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PFDN6O15212 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.62■□□□□ 0.57
PFDN6O15212 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.62■□□□□ 0.57
PFDN6O15212 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.62■□□□□ 0.57
PFDN6O15212 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 MCCD1P1-208ENST00000445732 328 ntBASIC18.62■□□□□ 0.57
PFDN6O15212 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.62■□□□□ 0.57
PFDN6O15212 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.62■□□□□ 0.57
PFDN6O15212 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.62■□□□□ 0.57
PFDN6O15212 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
PFDN6O15212 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PFDN6O15212 MTMR9LP-203ENST00000426597 1545 ntBASIC18.62■□□□□ 0.57
PFDN6O15212 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PFDN6O15212 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.62■□□□□ 0.57
PFDN6O15212 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
PFDN6O15212 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PFDN6O15212 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PFDN6O15212 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.61■□□□□ 0.57
PFDN6O15212 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.61■□□□□ 0.57
PFDN6O15212 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.61■□□□□ 0.57
PFDN6O15212 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.61■□□□□ 0.57
PFDN6O15212 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.61■□□□□ 0.57
PFDN6O15212 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PFDN6O15212 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PFDN6O15212 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.61■□□□□ 0.57
PFDN6O15212 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.61■□□□□ 0.57
PFDN6O15212 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.61■□□□□ 0.57
PFDN6O15212 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.61■□□□□ 0.57
PFDN6O15212 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PFDN6O15212 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.61■□□□□ 0.57
PFDN6O15212 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN6O15212 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PFDN6O15212 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.61■□□□□ 0.57
PFDN6O15212 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PFDN6O15212 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PFDN6O15212 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.6■□□□□ 0.57
PFDN6O15212 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.6■□□□□ 0.57
PFDN6O15212 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.6■□□□□ 0.57
PFDN6O15212 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PFDN6O15212 SLC25A1P2-201ENST00000430693 912 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms