Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TO15178 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TO15178 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.11■□□□□ 0.33
TO15178 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TO15178 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TO15178 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.11■□□□□ 0.33
TO15178 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TO15178 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.11■□□□□ 0.33
TO15178 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TO15178 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.11■□□□□ 0.33
TO15178 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TO15178 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TO15178 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TO15178 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.1■□□□□ 0.33
TO15178 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.1■□□□□ 0.33
TO15178 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TO15178 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.1■□□□□ 0.33
TO15178 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.1■□□□□ 0.33
TO15178 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.1■□□□□ 0.33
TO15178 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.1■□□□□ 0.33
TO15178 AC140113.3-201ENST00000605663 199 ntBASIC17.1■□□□□ 0.33
TO15178 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.1■□□□□ 0.33
TO15178 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
TO15178 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.1■□□□□ 0.33
TO15178 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TO15178 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
TO15178 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.09■□□□□ 0.33
TO15178 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 AC117947.1-201ENST00000427448 529 ntBASIC17.09■□□□□ 0.33
TO15178 YBX1P2-201ENST00000489612 999 ntBASIC17.09■□□□□ 0.33
TO15178 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.09■□□□□ 0.33
TO15178 RN7SL850P-201ENST00000579959 291 ntBASIC17.09■□□□□ 0.33
TO15178 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.09■□□□□ 0.33
TO15178 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 AC139887.4-201ENST00000607877 719 ntBASIC17.09■□□□□ 0.33
TO15178 AC024243.1-201ENST00000609234 778 ntBASIC17.09■□□□□ 0.33
TO15178 AC006011.2-201ENST00000621313 1158 ntBASIC17.09■□□□□ 0.33
TO15178 AC011558.1-201ENST00000623459 338 ntBASIC17.09■□□□□ 0.33
TO15178 AL023973.1-201ENST00000624619 620 ntBASIC17.09■□□□□ 0.33
TO15178 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TO15178 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.09■□□□□ 0.33
TO15178 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.09■□□□□ 0.33
TO15178 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TO15178 AL499627.1-201ENST00000569373 2188 ntBASIC17.09■□□□□ 0.33
TO15178 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TO15178 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TO15178 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TO15178 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.08■□□□□ 0.33
TO15178 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TO15178 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
TO15178 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TO15178 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TO15178 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TO15178 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TO15178 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.08■□□□□ 0.32
TO15178 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TO15178 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TO15178 FAM210CP-201ENST00000445714 574 ntBASIC17.08■□□□□ 0.32
TO15178 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.08■□□□□ 0.32
TO15178 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TO15178 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.08■□□□□ 0.32
TO15178 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TO15178 GCSHP2-201ENST00000560971 527 ntBASIC17.08■□□□□ 0.32
TO15178 AC009065.1-201ENST00000564055 1225 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms