Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 AC008694.1-202ENST00000636953 945 ntBASIC13.23□□□□□ -0.29
LINC01549A6NIU2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 AP006587.1-201ENST00000534129 1502 ntBASIC13.23□□□□□ -0.29
LINC01549A6NIU2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC01549A6NIU2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 SUDS3P1-201ENST00000505831 966 ntBASIC13.21□□□□□ -0.29
LINC01549A6NIU2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 KRT18P14-201ENST00000534205 1250 ntBASIC13.21□□□□□ -0.29
LINC01549A6NIU2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01549A6NIU2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms