Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 FEM1AP3-201ENST00000403722 1741 ntBASIC20.12■□□□□ 0.81
CCDC66A2RUB6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC66A2RUB6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 HLA-L-209ENST00000420110 1011 ntBASIC20.1■□□□□ 0.81
CCDC66A2RUB6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CCDC66A2RUB6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 AC098934.4-201ENST00000564127 592 ntBASIC20.09■□□□□ 0.81
CCDC66A2RUB6 AL138781.1-201ENST00000566567 1274 ntBASIC20.09■□□□□ 0.81
CCDC66A2RUB6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC66A2RUB6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC66A2RUB6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms