Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 AL357033.4-201ENST00000617703 1807 ntBASIC18.85■□□□□ 0.61
CCDC78A2IDD5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC78A2IDD5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 AC096733.2-201ENST00000609937 1394 ntBASIC18.84■□□□□ 0.61
CCDC78A2IDD5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 RBM17P1-201ENST00000453646 1190 ntBASIC18.84■□□□□ 0.61
CCDC78A2IDD5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 AP000525.1-201ENST00000608286 694 ntBASIC18.84■□□□□ 0.61
CCDC78A2IDD5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC78A2IDD5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 AC008556.1-201ENST00000610908 2040 ntBASIC18.83■□□□□ 0.61
CCDC78A2IDD5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC78A2IDD5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 TSPY15P-201ENST00000457163 923 ntBASIC18.83■□□□□ 0.6
CCDC78A2IDD5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 DGCR10-201ENST00000609839 495 ntBASIC18.83■□□□□ 0.6
CCDC78A2IDD5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 BCL2-203ENST00000589955 5011 ntBASIC18.83■□□□□ 0.6
CCDC78A2IDD5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 AC079598.2-202ENST00000546624 1451 ntBASIC18.83■□□□□ 0.6
CCDC78A2IDD5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC78A2IDD5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 AL355075.4-201ENST00000554988 638 ntBASIC18.82■□□□□ 0.6
CCDC78A2IDD5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms