Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 ESRRAP1-201ENST00000400596 1257 ntBASIC18.61■□□□□ 0.57
CCDC189A1A4V9 NIFKP9-201ENST00000419265 221 ntBASIC18.61■□□□□ 0.57
CCDC189A1A4V9 AL353807.1-201ENST00000427475 662 ntBASIC18.61■□□□□ 0.57
CCDC189A1A4V9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 AL023875.1-201ENST00000640777 796 ntBASIC18.61■□□□□ 0.57
CCDC189A1A4V9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 AC026271.3-201ENST00000571884 352 ntBASIC18.6■□□□□ 0.57
CCDC189A1A4V9 AC233263.1-201ENST00000578059 224 ntBASIC18.6■□□□□ 0.57
CCDC189A1A4V9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 AC103702.1-201ENST00000548801 2630 ntBASIC18.6■□□□□ 0.57
CCDC189A1A4V9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC189A1A4V9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 KSR1P1-201ENST00000446298 240 ntBASIC18.59■□□□□ 0.57
CCDC189A1A4V9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 AC092850.2-201ENST00000623821 2697 ntBASIC18.59■□□□□ 0.57
CCDC189A1A4V9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC189A1A4V9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CCDC189A1A4V9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC189A1A4V9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC189A1A4V9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC189A1A4V9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CCDC189A1A4V9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC189A1A4V9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms