Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 AL096828.2-201ENST00000567259 1965 ntBASIC16.21■□□□□ 0.19
SHISA3A0PJX4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 POU5F1P3-201ENST00000428824 1078 ntBASIC16.21■□□□□ 0.19
SHISA3A0PJX4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHISA3A0PJX4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SHISA3A0PJX4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHISA3A0PJX4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHISA3A0PJX4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 MIPEPP3-201ENST00000412105 444 ntBASIC16.2■□□□□ 0.18
SHISA3A0PJX4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.2■□□□□ 0.18
SHISA3A0PJX4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 AC091874.3-201ENST00000512672 1195 ntBASIC16.2■□□□□ 0.18
SHISA3A0PJX4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 AC092368.3-202ENST00000574180 1591 ntBASIC16.2■□□□□ 0.18
SHISA3A0PJX4 AC006116.8-202ENST00000587620 1550 ntBASIC16.2■□□□□ 0.18
SHISA3A0PJX4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
SHISA3A0PJX4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 AL121832.2-201ENST00000610979 668 ntBASIC16.19■□□□□ 0.18
SHISA3A0PJX4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SHISA3A0PJX4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 MYLKP1-201ENST00000509077 1580 ntBASIC16.18■□□□□ 0.18
SHISA3A0PJX4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 AC011676.5-201ENST00000624864 2660 ntBASIC16.18■□□□□ 0.18
SHISA3A0PJX4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms