Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 KRT18P29-201ENST00000397031 1267 ntBASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 AC096733.2-201ENST00000609937 1394 ntBASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV7S3A2A0A539 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 AC116562.2-201ENST00000507042 360 ntBASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 KRT18P41-201ENST00000518924 1277 ntBASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV7S3A2A0A539 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV7S3A2A0A539 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV7S3A2A0A539 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV7S3A2A0A539 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TCRBV7S3A2A0A539 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.89■□□□□ 0.62
TCRBV7S3A2A0A539 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV7S3A2A0A539 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.89■□□□□ 0.62
TCRBV7S3A2A0A539 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 MFAP1P1-201ENST00000442257 1255 ntBASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV7S3A2A0A539 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms