Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC034232.1-201ENST00000506026 1064 ntBASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC068587.9-201ENST00000641814 219 ntBASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 MYC-208ENST00000641036 567 ntBASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 BX323043.1-201ENST00000641006 1765 ntBASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IGHV4-28A0A0C4DH34 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 HEIH-201ENST00000623091 1652 ntBASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 STARP1-201ENST00000397973 869 ntBASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 SPDYE15P-201ENST00000424157 909 ntBASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IGHV4-28A0A0C4DH34 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms