Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRGV5A0A0B4J1U4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 KRT8P50-201ENST00000562022 1438 ntBASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 NPAP1P7-201ENST00000613027 823 ntBASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.65■□□□□ 0.26
TRGV5A0A0B4J1U4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRGV5A0A0B4J1U4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.64■□□□□ 0.26
TRGV5A0A0B4J1U4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRGV5A0A0B4J1U4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
TRGV5A0A0B4J1U4 AC016734.2-201ENST00000624325 1377 ntBASIC16.64■□□□□ 0.26
TRGV5A0A0B4J1U4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 TSPY22P-201ENST00000427496 604 ntBASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 AP003733.1-201ENST00000491725 852 ntBASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 KRT18P41-201ENST00000518924 1277 ntBASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 AC092119.3-201ENST00000612618 583 ntBASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV5A0A0B4J1U4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 AC092329.2-201ENST00000598402 547 ntBASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.63■□□□□ 0.25
TRGV5A0A0B4J1U4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms