Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 RCC2P3-201ENST00000418112 1537 ntBASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 AC004980.1-204ENST00000429707 299 ntBASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 AP003097.1-201ENST00000530657 1135 ntBASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 AL445675.2-201ENST00000620291 557 ntBASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 AL023875.1-201ENST00000640777 796 ntBASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.73■□□□□ 0.75
CAPN6Q9Y6Q1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 KRASP1-201ENST00000407852 552 ntBASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CAPN6Q9Y6Q1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 KRT16P5-201ENST00000455284 522 ntBASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CAPN6Q9Y6Q1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 MYLKP1-201ENST00000509077 1580 ntBASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms